Publications Lab members underlined, Corresponding author in bold Ozcan, S. C., Amador, D. G., Powers, J., Njiru, A., Ansari, Z., & Woappi, Y. 2025. RESTRICT-seq enables time-gated CRISPR screens and uncovers novel epigenetic dependencies of SCC resistance. bioRxiv. DOI: 10.1101/2024.12.23.630186 Beker, O., Amador, D., Pomarino Nima, J.F., Van Deursen, S., Woappi, Y. & Dumitrascu, B., 2024. Patches: A Representation Learning framework for Decoding Shared and Condition-Specific Transcriptional Programs in Wound Healing. bioRxiv. DOI: 10.1101/2024.12.23.630186 Woappi, Y; Boudra, R; Wang, D; Xu, S; Wells, M; Schmults, C; Lian, C; Ramsey, R. Regulation of 5-Hydroxymethylcytosine by TET2 Contributes to Squamous Cell Carcinoma Tumorigenesis (2022). Journal of Investigative Dermatology. DOI: 10.1016/j.jid.2021.09.026. Woappi, Y.; Ezeka, G; Vercellino, J; Bloos, S; Kim, C; and Pirisi, L. Establishing a High Throughput Epidermal Spheroid Culture System to Model Keratinocyte Stem Cell Plasticity (2021). Journal of Visualized Experiments DOI: 10.3791/62182. Woappi, Y; Altomare, D; Creek, K; and Pirisi, L. Self-assembling 3D spheroid cultures of human neonatal keratinocytes have enhanced regenerative properties. Stem Cell Research. (2020). DOI: 10.1016/j.scr.2020.102048 Feng, Li; Yuan, C; Xu, S; Zu, T; Woappi, Y; Lee, C; Abarzua, P; Wells, M; Ramsey, M; Frank, N; Wu, X; Mandinova, N; Frank, M; Lian, C; and Murphy, G. Loss of the Epigenetic Mark 5-hmC in Psoriasis: Implications for Epidermal Stem Cell Dysregulation (2020). Journal of Investigative Dermatology. DOI: 10.1016/j.jid.2019.10.016 Woappi, Y; Hosseinipour, M; Creek, K; and Pirisi, L. Stem Cell Properties of Normal Human Keratinocytes Determine Transformation Responses to Human Papillomavirus 16 DNA (2018) DOI: https://doi.org/10.1128/JVI.00331-18 Woappi, Y and Singh, Om. Commensals and Foodborne Pathogens can Arbitrate Epithelial-carcinogenesis (2016). DOI: 10.9734/BMRJ/2016/26690 Woappi, Y., Jangiti, R., Singh, Om. Synthetic immunosurveillance systems: Nanodevices to monitor physiological events. Biosensors and Bioelectronics. (2014). DOI: 10.1016/j.bios.2014.04.056 Woappi, Y; Gabani, P; Singh, A; Singh, O. Antibiotrophs: The complexity of antibiotic-subsisting andantibiotic-resistant microorganisms (2014). DOI: 10.3109/1040841X.2013.875982 Woappi, Y; Gabani, P and Singh, O. Emergence of Antibiotic-Producing Microorganisms in Residential Versus Recreational Microenvironments (2013). DOI: 10.9734/BMRJ/2013/3205
